ITS metabarcoding of Festuca roemeri fungal endophytes from USA: Wash... - SRA

SRX26075747: ITS metabarcoding of Festuca roemeri fungal endophytes from USA: Washington, Coupeville, Whidbey Island
1 ILLUMINA (Illumina MiSeq) run: 59,954 spots, 36.1M bases, 22.7Mb downloads

Design: DNA extracted from plant leaves using column extraction kits, amplified with 16S ITS1F/ITS2 primers, PCR product diluted to 7.013 ng/l for sequencing.

Submitted by: University of Bayreuth

Study: Sampling of native grass endophyte communities in endangered prairies of the Pacific Northwest, USA

PRJNA1160472 • SRP532455 • All experiments • All runs

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Using culture-free, full-community DNA sequencing, we investigated the diversity, composition, and structure of full fungal foliar endophyte communities in two species of native, cool-season bunchgrasses.

Sample: S72

SAMN43755546 • SRS22643988 • All experiments • All runs

Organism: leaf metagenome

Library:

Name: s072-index-GAGGACTT-ACAGGCATNNNN

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 59,954 spots, 36.1M bases, 22.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR30655613	59,954	36.1M	22.7Mb	2024-09-13

ID:: 35187275

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